hoodscanR
Profiling single-cell neighbourhoods in spatial transcriptomics · ~4,500 downloads
hoodscanR profiles single-cell neighbourhoods (“hoods”) in spatial transcriptomics data, quantifying cellular co-localisation and tissue micro-architecture to reveal spatial organisation that bulk analyses miss.
- 📄 Preprint (under review, Bioinformatics)
- 📦 Bioconductor
- 💻 GitHub