standR

Spatial transcriptomic analysis for GeoMx DSP data · Nucleic Acids Research (2024) · ~8,000 downloads

standR is a Bioconductor R package for the end-to-end analysis of GeoMx Digital Spatial Profiler (DSP) transcriptomics data — quality control, normalisation, batch correction, and differential expression — built on the Bioconductor SpatialExperiment ecosystem.